Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015943337.1_cds_XP_016486532.1_77365
CDS Infomation

[gene=LOC107806807] [db_xref=GeneID:107806807] [protein=acetate/butyrate--CoA ligase AAE7, peroxisomal-like] [protein_id=XP_016486532.1] [location=join(31495..31707,34576..35166,35718..36614)] [gbkey=CDS]
Sequence

ATGGCGGAAAGAGACATAGACGATCTTCCAAAGAATTCAGCGAACTACACCGCGTTAACT
CCGTTATGGTTTTTAGATAGAGCAGCGACGGTGTATCCAAATCGCAAGTCGTTAATTCAT
GGCTCCGTTGAGTACACGTGGCACCAGACTTACCGCCGTTGCCGTCAATTGGCCTCTGCT
CTCACCAAACGGTCCGTCACCTTTGGTAGCACGGTTGCAGTTATTGCCCCAAACATCTCC
GCTTTGTATGAAGCTCATTTTGGAATTCCAATGGCTGGAGCTGTTTTAAATGCTGTTAAT
GTTCGTCTAAATGCACAAACGATTGCTTTTCTTTTGGGCCATAGCTCGGCTGTTGTTGTC
ATGGTGGACCAAGAGTATTTTCCCTTGGCTGAGGAAGCTCTAAAAGTATGGGAAAATAAC
AGTAAAGGAAAATTTAAGGCTCCAATTCTGATTGTAATTGCTGATAAAAACTGTGATCCA
GCGCCAGTCCAATATGCTCTTGAGAAAGGGGCTATTGAATACGAGAAATTCCTAGAAACT
GGCGATCCAGACTTTCCATGGAAGCCACCAGAGGATGAGTGGCAAACTATTGCTTTGGGC
TATACTTCCGGCACAACAGCTAGTCCTAAAGGAGTGGTGCTGCACCATCGTGGCGCTTAT
CTTATGGCTCTGAGTAACGCTGTGATTTGGAGTATGCAAGAGGGAGCTGTGTATCTGTGG
ACTCTGCCATTATTTCACTGTAATGGTTGGTGTTTCGCTTGGACGCTTGCTGCAATTTGT
GGGACTAACATATGCCTTAGACAGGTAACTGCAAAGGCTGTTTACTCGGCTATAGCCCAT
CTTGGTGTAACCCATTTCTCTGCTGCTCCTGTGGTGCTCAACACCATAGTTAATGCCCCA
AAAGAGGAGACCATCCTTCCTTTGCCTCGTCTTGTGCACGTCAGCACAGCCGGTGCTTCT
CCTCCTCCTCCTGTTCTTGCAGCAATGTCACAACGTGGCTTCCGTGTCTTACACACTTAT
GGACTTTCTGAAACCTATGGCCCCTCCACTCTCTGCACGTGGAAGCCCGAGTGGGATTTA
CTTCCCCCAGACGTCCAGGCACGTCTGCATGCACGCCAAGGTGTGAGATATGTTGGTTTG
GAGGGGTTAGGTGTTGTTAGCACAAAAGACATGAAACCTGTCCCAGAAGACGGCAAAACA
ATAGGAGAGATTGTATTCAGAGGTAATGTTGTAATGAAAGGGTACCTGAAGAATCCTAAA
GCTAACGAGGACGCTTTTGCTGGAGGCTGGTATCACTCTGGTGATCTTGCAGTTAAGCAT
CCGGACGGATATATAGAAATCAAAGACAGATCAAAGGACATCATCATTTCTGGTGGTGAA
AACATAAGTAGTGTCGAGGTCGAGAATATCCTATATCTACATCCAGCAATACTAGAGGTC
TCTGTAGTGGCAAGGCCCGATGAGCAGTGGGGTGAATCGCCATGTGCTTTCGTGACATTA
AAGGCTGATGTGAAGAAAACAGATCAACAACAGTTGGCAGAAGATATTATGAACTTTAGT
CGATCGAAAATGCCTAAGTACTGGGTTCCAAAATCAGTTGTGTTTGGACCATTGCCAAAG
ACTGCTACTGGGAAAATACAAAAGCACTTGTTGAGGACAAAGGCAAAGGAGATGGGACCA
GTGAAGAAGAGTAGATTGTAA

Peptide Sequence

PEP ID

XP_016486532.1
PEP Infomation

PREDICTED: acetate/butyrate--CoA ligase AAE7, peroxisomal-like [Nicotiana tabacum]
Sequence

MAERDIDDLPKNSANYTALTPLWFLDRAATVYPNRKSLIHGSVEYTWHQTYRRCRQLASA
LTKRSVTFGSTVAVIAPNISALYEAHFGIPMAGAVLNAVNVRLNAQTIAFLLGHSSAVVV
MVDQEYFPLAEEALKVWENNSKGKFKAPILIVIADKNCDPAPVQYALEKGAIEYEKFLET
GDPDFPWKPPEDEWQTIALGYTSGTTASPKGVVLHHRGAYLMALSNAVIWSMQEGAVYLW
TLPLFHCNGWCFAWTLAAICGTNICLRQVTAKAVYSAIAHLGVTHFSAAPVVLNTIVNAP
KEETILPLPRLVHVSTAGASPPPPVLAAMSQRGFRVLHTYGLSETYGPSTLCTWKPEWDL
LPPDVQARLHARQGVRYVGLEGLGVVSTKDMKPVPEDGKTIGEIVFRGNVVMKGYLKNPK
ANEDAFAGGWYHSGDLAVKHPDGYIEIKDRSKDIIISGGENISSVEVENILYLHPAILEV
SVVARPDEQWGESPCAFVTLKADVKKTDQQQLAEDIMNFSRSKMPKYWVPKSVVFGPLPK
TATGKIQKHLLRTKAKEMGPVKKSRL

Transcript Sequence

Gene sequence data has not been registered.